CottonENCODE
Cotton Encyclopedia of DNA Elements
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Open Chromatin
H3K27ac modification
H3K4me3 modification
3D genome A/B compartment
3D genome Sub-compartments
3D genome TAD-like domains
3D genome loops
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HiGlass Multi-Scale Browser
Multi-omics dataset visualisation
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Open chromatin search
Choose tissue:
anther
fiber_10DPA
fiber_20DPA
hypocotyl
ovule
petal
radicle
stigma
Gene id search:
Gene id:
Extension start:
Extension end:
Search geneid
Example:
Ghir_A03G018310
.
The default extension region surrounding the gene is set at 3 Kb, but users have the option to adjust it according to their specific requirements.
Region search:
Chromosome
Start:
End:
Search region
Extend region:
Region
point
Example:
Ghir_A02
,
0
,
25000
.
Region
: Provides an overview of the selected regions.
Point
:Provides an overview of the regions connected to the selected locus by loops.
Download Table
Please download the form to check the full annotated information